analogue-package	analogue-package
.simpleCap	analogue-internal
abernethy	abernethy
analog	analog
analog.default	analog
analog.distance	analog
analogue	analogue-package
as.data.frame.optima	optima
as.data.frame.tolerance	optima
bayesF	bayesF
Biome	Pollen
bootstrap	bootstrap
bootstrap.default	bootstrap
bootstrap.mat	bootstrap
bootstrap.wa	bootstrap.wa
bootstrapObject	bootstrapObject
caterpillar	caterpillarPlot
caterpillarPlot	caterpillarPlot
caterpillarPlot.data.frame	caterpillarPlot
caterpillarPlot.default	caterpillarPlot
caterpillarPlot.wa	caterpillarPlot
ChiSquare	pcr
chooseTaxa	chooseTaxa
chooseTaxa.default	chooseTaxa
Climate	Pollen
cma	cma
cma.analog	cma
cma.default	cma
cma.mat	cma
cma.predict.mat	cma
coef.pcr	pcr
coef.wa	wa
ColSums	analogue-internal
compare	compare
compare.default	compare
crossval	crossval
crossval.pcr	crossval
crossval.wa	crossval
cummean	analogue-internal
cumWmean	analogue-internal
densityplot	densityplot.residLen
densityplot.residLen	densityplot.residLen
deshrink	deshrink
deshrink.pred	analogue-internal
deshrinkPred	deshrink
dissim	dissimilarities
dissimilarities	dissimilarities
dissimilarities.analog	dissimilarities
dissimilarities.mat	dissimilarities
distance	distance
distance.default	distance
distance.join	distance
dotplot	rankDC
dotplot.rankDC	rankDC
eigenvals.pcr	pcr
evenSample	evenlySampled
fitted.bootstrap.mat	bootstrap
fitted.logitreg	fitted.logitreg
fitted.mat	mat
fitted.pcr	pcr
fitted.prcurve	predict.prcurve
fitted.timetrack	timetrack
fitted.wa	wa
fittedY	residLen
fixUpTol	analogue-internal
fuse	fuse
fuse.dist	fuse
fuse.matrix	fuse
getK	getK
getK.bootstrap.mat	getK
getK.default	getK
getK.mat	getK
getK.predict.mat	getK
gradientDist	gradientDist
gradientDist.cca	gradientDist
gradientDist.default	gradientDist
gradientDist.prcurve	gradientDist
head.join	join
Hellinger	pcr
hist.residLen	hist.residLen
histogram	histogram.residLen
histogram.residLen	histogram.residLen
ImbrieKipp	ImbrieKipp
initCurve	prcurve
join	join
lines.prcurve	plot.prcurve
Location	Pollen
logitreg	logitreg
logitreg.analog	logitreg
logitreg.default	logitreg
mat	mat
mat.default	mat
mat.formula	mat
maxBias	analogue-internal
mcarlo	mcarlo
mcarlo.analog	mcarlo
mcarlo.default	mcarlo
mcarlo.mat	mcarlo
minDC	minDC
minDC.analog	minDC
minDC.default	minDC
minDC.predict.mat	minDC
minDC.wa	minDC
minDij	analogue-internal
n2	n2
n2.default	n2
oldDistance	distance
oldDistance.default	distance
oldDistance.join	distance
optima	optima
optima.default	optima
panel.Loess	panel.Loess
panel.Stratiplot	panel.Stratiplot
pcr	pcr
pcr.default	pcr
pcr.formula	pcr
performance	performance
performance.bootstrap.wa	performance
performance.crossval	performance
performance.pcr	pcr
performance.predict.wa	performance
performance.wa	performance
plot.bayesF	bayesF
plot.cma	cma
plot.dissimilarities	plot.dissimilarities
plot.evenSample	plot.evenSample
plot.logitreg	plot.logitreg
plot.mat	plot.mat
plot.mcarlo	plot.mcarlo
plot.minDC	plot.minDC
plot.prcurve	plot.prcurve
plot.rankDC	rankDC
plot.residLen	plot.residLen
plot.roc	plot.roc
plot.sppResponse	plot.sppResponse
plot.timetrack	timetrack
plot.wa	plot.wa
plot.weightedCor	weightedCor
points.timetrack	timetrack
Pollen	Pollen
prcurve	prcurve
predict.logitreg	predict.logitreg
predict.mat	predict.mat
predict.pcr	predict.pcr
predict.prcurve	predict.prcurve
predict.timetrack	timetrack
predict.wa	predict.wa
print.analog	analog
print.bayesF	bayesF
print.bootstrap.mat	bootstrap
print.bootstrap.wa	bootstrap.wa
print.cma	cma
print.crossval	crossval
print.fitted.bootstrap.mat	bootstrap
print.fitted.mat	mat
print.logitreg	logitreg
print.mat	mat
print.mcarlo	mcarlo
print.minDC	minDC
print.optima	optima
print.pcr	pcr
print.performance	performance
print.prcurve	prcurve
print.predict.mat	predict.mat
print.predict.wa	predict.wa
print.rankDC	rankDC
print.residLen	residLen
print.residuals.bootstrap.mat	bootstrap
print.residuals.mat	mat
print.roc	roc
print.summary.analog	summary.analog
print.summary.bootstrap.mat	summary.bootstrap.mat
print.summary.cma	summary.cma
print.summary.logitreg	logitreg
print.summary.mat	summary.mat
print.summary.predict.mat	summary.predict.mat
print.summary.roc	roc
print.timetrack	timetrack
print.tolerance	optima
print.wa	wa
print.weightedCor	weightedCor
rankDC	rankDC
rdaFit	analogue-internal
reconPlot	reconPlot
reconPlot.default	reconPlot
reconPlot.predict.mat	reconPlot
reconPlot.predict.wa	reconPlot
resid.bootstrap.mat	bootstrap
resid.mat	mat
resid.prcurve	residuals.prcurve
residLen	residLen
residuals.bootstrap.mat	bootstrap
residuals.mat	mat
residuals.pcr	pcr
residuals.prcurve	residuals.prcurve
residuals.wa	wa
rlgh	rlgh
RMSEP	RMSEP
RMSEP.bootstrap.mat	RMSEP
RMSEP.bootstrap.wa	RMSEP
RMSEP.default	RMSEP
RMSEP.mat	RMSEP
roc	roc
roc.analog	roc
roc.default	roc
roc.mat	roc
RowSums	analogue-internal
Salinity	ImbrieKipp
scores.prcurve	scores.prcurve
scores.rdaFit	analogue-internal
scores.timetrack	timetrack
screeplot.bootstrap.mat	screeplot
screeplot.mat	screeplot
screeplot.pcr	pcr
setK<-	getK
setK<-.default	getK
setK<-.mat	getK
smoothGAM	smoothFuns
smoothSpline	smoothFuns
splitSample	splitSample
sppN2	analogue-internal
sppResponse	sppResponse.prcurve
sppResponse.prcurve	sppResponse.prcurve
sqrlLinear	residLen
sqrlUnimodal	residLen
stdError	stdError
stdError.mat	stdError
stdError.predict.mat	stdError
Stratiplot	Stratiplot
Stratiplot.default	Stratiplot
Stratiplot.formula	Stratiplot
Stratiplot.matrix	Stratiplot
summary.analog	summary.analog
summary.bootstrap.mat	summary.bootstrap.mat
summary.cma	summary.cma
summary.logitreg	logitreg
summary.mat	summary.mat
summary.predict.mat	summary.predict.mat
summary.roc	roc
SumSST	ImbrieKipp
swapdiat	swapdiat
swappH	swappH
tail.join	join
timetrack	timetrack
tolerance.default	optima
tortula	tortula
tran	tran
tran.default	tran
tran.formula	tran
V12.122	ImbrieKipp
varExpl	varExpl
varExpl.cca	varExpl
varExpl.default	varExpl
varExpl.prcurve	varExpl
w.avg	analogue-internal
w.tol	analogue-internal
wa	wa
wa.default	wa
wa.formula	wa
waFit	wa
WApred	analogue-internal
WATpred	analogue-internal
weightedCor	weightedCor
weightedCor.default	weightedCor
WinSST	ImbrieKipp
wmean	analogue-internal
