This directory contains the two examples discussed in the paper, along with the data and transcripts of R sessions. They are provided for reference.
Version 0.25.1 of distcomp relied on imports from httr version
below 0.6.x. Since then, package httr has been updated to version
1.x using a new curl library and distcomp has now been updated to
account for them. The changes are pretty minor but the parameters for
the httr::POST requests that distcomp makes are different: the SSL
options are now named with underscores and the parameter values are
now not logical but integer, with 0L for FALSE and 1L for
TRUE. All our examples work as before (see the examples in the doc
directory). The transcripts here have been updated for version 0.25.4
of distcomp with session information along with some improvements.
| Name | Description |
|---|---|
README.Rmd, README.Rmd |
This file plus generated Markdown |
Rprofile |
Example Rprofile for use with distcomp for setting up workspace for |
running examples locally with opencpu R package |
|
STCoxSetup.Rout |
R Transcript for defining computation, setting up worker sites, and |
| master process using shiny apps. | |
STCoxDefn.rds |
The generated definition file for Stratified Cox Example |
STCoxMaster.R |
Master R code produced by webapp; see transcript STCoxSetup.Rout |
STCoxMaster.Rout |
R Transcript executing STCoxMaster.R |
SVDSetup.Rout |
R Transcript for defining computation, setting up worker sites, and |
| master process using shiny apps. | |
SVDDefn.rds |
The generated definition file for SVD Example |
SVDMaster.R |
Master R code produced by webapp; see transcript SVDSetup.Rout |
SVDMaster.Rout |
R Transcript executing SVDMaster.R |
svd-example.R |
Plain R code for svd example |
svd-example.Rout |
R Transcript executing svd-example.R including all 5 singular values |
svd-site1.csv |
Data for Site 1 in svd example |
svd-site2.csv |
Data for Site 2 in svd example |
svd-site3.csv |
Data for Site 3 in svd example |
uis-example.R |
Plain R code for uis example |
uis-example.Rout |
R Transcript executing uis-example.R |
uis-site1.csv |
Data for Site 1 in uis example |
uis-site2.csv |
Data for Site 2 in uis example |
uis.RDS |
UIS data for comparing aggregated results |