# This file created by conda-build 3.24.0
# meta.yaml template originally from:
# /aggregate/r-seurat-feedstock/recipe, last modified Fri Nov  3 04:06:29 2023
# ------------------------------------------------

package:
  name: r-seurat
  version: 4.4.0
source:
  sha256: 0f17df9597642cfc1db4d8718f0b59ebab9fbed328b1f885f42ee85ea0dcb4dd
  url:
    - https://cran.r-project.org/src/contrib/Archive/Seurat/Seurat_4.4.0.tar.gz
    - https://cran.r-project.org/src/contrib/Seurat_4.4.0.tar.gz
build:
  number: '0'
  rpaths:
    - lib/
    - lib/R/lib/
  string: r43h884c59f_0
requirements:
  build:
    - _libgcc_mutex 0.1 main
    - _openmp_mutex 5.1 1_gnu
    - _sysroot_linux-64_curr_repodata_hack 3 haa98f57_10
    - binutils_impl_linux-64 2.38 h2a08ee3_1
    - binutils_linux-64 2.38.0 hc2dff05_0
    - gcc_impl_linux-64 11.2.0 h1234567_1
    - gcc_linux-64 11.2.0 h5c386dc_0
    - gxx_impl_linux-64 11.2.0 h1234567_1
    - gxx_linux-64 11.2.0 hc2dff05_0
    - kernel-headers_linux-64 3.10.0 h57e8cba_10
    - ld_impl_linux-64 2.38 h1181459_1
    - libgcc-devel_linux-64 11.2.0 h1234567_1
    - libgcc-ng 11.2.0 h1234567_1
    - libgomp 11.2.0 h1234567_1
    - libstdcxx-devel_linux-64 11.2.0 h1234567_1
    - libstdcxx-ng 11.2.0 h1234567_1
    - make 4.2.1 h1bed415_1
    - sysroot_linux-64 2.17 h57e8cba_10
  host:
    - _libgcc_mutex 0.1 main
    - _openmp_mutex 5.1 1_gnu
    - _r-mutex 1.0.0 anacondar_1
    - _sysroot_linux-64_curr_repodata_hack 3 haa98f57_10
    - binutils_impl_linux-64 2.38 h2a08ee3_1
    - binutils_linux-64 2.38.0 hc2dff05_0
    - blas 1.0 openblas
    - bwidget 1.9.11 1
    - bzip2 1.0.8 h7b6447c_0
    - c-ares 1.19.1 h5eee18b_0
    - ca-certificates 2023.08.22 h06a4308_0
    - cairo 1.16.0 hb05425b_5
    - curl 8.4.0 hdbd6064_0
    - expat 2.5.0 h6a678d5_0
    - fontconfig 2.14.1 h4c34cd2_2
    - freetype 2.12.1 h4a9f257_0
    - fribidi 1.0.10 h7b6447c_0
    - gcc_impl_linux-64 11.2.0 h1234567_1
    - gcc_linux-64 11.2.0 h5c386dc_0
    - gfortran_impl_linux-64 11.2.0 h1234567_1
    - gfortran_linux-64 11.2.0 hc2dff05_0
    - glib 2.69.1 he621ea3_2
    - graphite2 1.3.14 h295c915_1
    - gxx_impl_linux-64 11.2.0 h1234567_1
    - gxx_linux-64 11.2.0 hc2dff05_0
    - harfbuzz 4.3.0 hf52aaf7_2
    - icu 73.1 h6a678d5_0
    - jpeg 9e h5eee18b_1
    - kernel-headers_linux-64 3.10.0 h57e8cba_10
    - krb5 1.20.1 h143b758_1
    - ld_impl_linux-64 2.38 h1181459_1
    - lerc 3.0 h295c915_0
    - libcurl 8.4.0 h251f7ec_0
    - libdeflate 1.17 h5eee18b_1
    - libedit 3.1.20221030 h5eee18b_0
    - libev 4.33 h7f8727e_1
    - libffi 3.4.4 h6a678d5_0
    - libgcc-devel_linux-64 11.2.0 h1234567_1
    - libgcc-ng 11.2.0 h1234567_1
    - libgfortran-ng 11.2.0 h00389a5_1
    - libgfortran5 11.2.0 h1234567_1
    - libgomp 11.2.0 h1234567_1
    - libnghttp2 1.57.0 h2d74bed_0
    - libopenblas 0.3.21 h043d6bf_0
    - libpng 1.6.39 h5eee18b_0
    - libssh2 1.10.0 hdbd6064_2
    - libstdcxx-devel_linux-64 11.2.0 h1234567_1
    - libstdcxx-ng 11.2.0 h1234567_1
    - libtiff 4.5.1 h6a678d5_0
    - libuuid 1.41.5 h5eee18b_0
    - libwebp-base 1.3.2 h5eee18b_0
    - libxcb 1.15 h7f8727e_0
    - libxml2 2.10.4 hf1b16e4_1
    - lz4-c 1.9.4 h6a678d5_0
    - make 4.2.1 h1bed415_1
    - ncurses 6.4 h6a678d5_0
    - openssl 3.0.12 h7f8727e_0
    - pandoc 2.12 h06a4308_3
    - pango 1.50.7 h05da053_0
    - pcre 8.45 h295c915_0
    - pcre2 10.42 hebb0a14_0
    - pixman 0.40.0 h7f8727e_1
    - python 3.11.5 h955ad1f_0
    - r-abind 1.4_5 r43h142f84f_0
    - r-askpass 1.2.0 r43h76d94ec_0
    - r-base 4.3.1 h1ae530e_0
    - r-base64enc 0.1_3 r43h76d94ec_4
    - r-bh 1.81.0_1 r43h6115d3f_0
    - r-bitops 1.0_7 r43h76d94ec_0
    - r-bslib 0.5.1 r43h6115d3f_0
    - r-cachem 1.0.8 r43h76d94ec_0
    - r-catools 1.18.2 r43h884c59f_0
    - r-cli 3.6.1 r43h884c59f_0
    - r-cluster 2.1.4 r43h640688f_0
    - r-codetools 0.2_19 r43h6115d3f_0
    - r-colorspace 2.1_0 r43h76d94ec_0
    - r-commonmark 1.9.0 r43h76d94ec_0
    - r-cowplot 1.1.1 r43h6115d3f_0
    - r-cpp11 0.4.6 r43h6115d3f_0
    - r-crayon 1.5.2 r43h6115d3f_0
    - r-crosstalk 1.2.0 r43h6115d3f_0
    - r-curl 5.1.0 r43h76d94ec_0
    - r-data.table 1.14.8 r43h76d94ec_0
    - r-deldir 1.0_9 r43h640688f_1
    - r-digest 0.6.33 r43h884c59f_0
    - r-dotcall64 1.1_0 r43h640688f_0
    - r-dplyr 1.1.3 r43h884c59f_0
    - r-dqrng 0.3.1 r43h884c59f_0
    - r-ellipsis 0.3.2 r43h76d94ec_0
    - r-evaluate 0.22 r43h6115d3f_0
    - r-fansi 1.0.5 r43h76d94ec_0
    - r-farver 2.1.1 r43h884c59f_0
    - r-fastmap 1.1.1 r43h884c59f_0
    - r-fitdistrplus 1.1_11 r43h6115d3f_0
    - r-fnn 1.1.3.2 r43h884c59f_0
    - r-fontawesome 0.5.2 r43h6115d3f_0
    - r-fs 1.6.3 r43h884c59f_0
    - r-future 1.33.0 r43h6115d3f_0
    - r-future.apply 1.11.0 r43h6115d3f_0
    - r-generics 0.1.3 r43h142f84f_0
    - r-ggplot2 3.4.4 r43h6115d3f_0
    - r-ggrepel 0.9.4 r43h884c59f_0
    - r-ggridges 0.5.4 r43h6115d3f_0
    - r-globals 0.16.2 r43h142f84f_0
    - r-glue 1.6.2 r43h76d94ec_0
    - r-goftest 1.2_3 r43h76d94ec_0
    - r-gplots 3.1.3 r43h6115d3f_0
    - r-gridextra 2.3 r43h6115d3f_0
    - r-gtable 0.3.4 r43h6115d3f_0
    - r-gtools 3.9.4 r43h76d94ec_0
    - r-here 1.0.1 r43h142f84f_0
    - r-highr 0.10 r43h6115d3f_0
    - r-htmltools 0.5.6.1 r43h76d94ec_0
    - r-htmlwidgets 1.6.2 r43h6115d3f_0
    - r-httpuv 1.6.11 r43h884c59f_0
    - r-httr 1.4.7 r43h6115d3f_0
    - r-ica 1.0_3 r43h142f84f_0
    - r-igraph 1.5.1 r43hb5eb8f6_0
    - r-irlba 2.3.5.1 r43h76d94ec_0
    - r-isoband 0.2.7 r43h884c59f_0
    - r-jquerylib 0.1.4 r43h6115d3f_0
    - r-jsonlite 1.8.7 r43h76d94ec_0
    - r-kernsmooth 2.23_22 r43h640688f_0
    - r-knitr 1.44 r43h6115d3f_0
    - r-labeling 0.4.3 r43h6115d3f_0
    - r-later 1.3.1 r43h884c59f_0
    - r-lattice 0.22_5 r43h76d94ec_0
    - r-lazyeval 0.2.2 r43h76d94ec_0
    - r-leiden 0.4.3 r43h142f84f_0
    - r-lifecycle 1.0.3 r43h142f84f_0
    - r-listenv 0.9.0 r43h142f84f_0
    - r-lmtest 0.9_40 r43h640688f_0
    - r-magrittr 2.0.3 r43h76d94ec_0
    - r-mass 7.3_60 r43h76d94ec_0
    - r-matrix 1.6_1.1 r43h76d94ec_0
    - r-matrixstats 1.0.0 r43h76d94ec_0
    - r-memoise 2.0.1 r43h6115d3f_0
    - r-mgcv 1.9_0 r43h76d94ec_0
    - r-mime 0.12 r43h76d94ec_0
    - r-miniui 0.1.1.1 r43h6115d3f_0
    - r-munsell 0.5.0 r43h6115d3f_0
    - r-nlme 3.1_163 r43h640688f_0
    - r-openssl 2.1.1 r43h76d94ec_0
    - r-parallelly 1.36.0 r43h6115d3f_0
    - r-patchwork 1.1.3 r43h6115d3f_0
    - r-pbapply 1.7_2 r43h142f84f_0
    - r-pillar 1.9.0 r43h6115d3f_0
    - r-pkgconfig 2.0.3 r43h6115d3f_0
    - r-plotly 4.10.2 r43h6115d3f_0
    - r-plyr 1.8.9 r43h884c59f_0
    - r-png 0.1_8 r43h76d94ec_0
    - r-polyclip 1.10_6 r43h884c59f_0
    - r-progressr 0.14.0 r43h6115d3f_0
    - r-promises 1.2.1 r43h884c59f_0
    - r-purrr 1.0.2 r43h76d94ec_0
    - r-r6 2.5.1 r43h6115d3f_0
    - r-rann 2.6.1 r43h884c59f_0
    - r-rappdirs 0.3.3 r43h76d94ec_0
    - r-rcolorbrewer 1.1_3 r43h6115d3f_1
    - r-rcpp 1.0.11 r43h884c59f_0
    - r-rcppannoy 0.0.21 r43h884c59f_0
    - r-rcpparmadillo 0.12.6.4.0 r43h884c59f_0
    - r-rcppeigen 0.3.3.9.3 r43h884c59f_0
    - r-rcppprogress 0.4.2 r43h142f84f_0
    - r-rcpptoml 0.2.2 r43h884c59f_0
    - r-reshape2 1.4.4 r43h884c59f_0
    - r-reticulate 1.34.0 py311r43h884c59f_0
    - r-rlang 1.1.1 r43h884c59f_0
    - r-rmarkdown 2.25 r43h6115d3f_0
    - r-rocr 1.0_11 r43h6115d3f_0
    - r-rprojroot 2.0.3 r43h6115d3f_0
    - r-rtsne 0.16 r43h884c59f_0
    - r-sass 0.4.7 r43h884c59f_0
    - r-scales 1.2.1 r43h6115d3f_0
    - r-scattermore 1.2 r43h884c59f_0
    - r-sctransform 0.4.1 r43h884c59f_0
    - r-seuratobject 5.0.0 r43h884c59f_0
    - r-shiny 1.7.5.1 r43h6115d3f_0
    - r-sitmo 2.0.2 r43h884c59f_0
    - r-sourcetools 0.1.7_1 r43h884c59f_0
    - r-sp 2.1_1 r43h76d94ec_0
    - r-spam 2.9_1 r43h640688f_0
    - r-spatstat.data 3.0_1 r43h6115d3f_0
    - r-spatstat.explore 3.2_3 r43h76d94ec_0
    - r-spatstat.geom 3.2_5 r43h76d94ec_0
    - r-spatstat.random 3.1_6 r43h884c59f_0
    - r-spatstat.sparse 3.0_2 r43h76d94ec_0
    - r-spatstat.utils 3.0_3 r43h76d94ec_0
    - r-stringi 1.7.12 r43h884c59f_0
    - r-stringr 1.5.0 r43h6115d3f_0
    - r-survival 3.5_7 r43h76d94ec_0
    - r-sys 3.4.2 r43h76d94ec_0
    - r-tensor 1.5 r43h142f84f_0
    - r-tibble 3.2.1 r43h76d94ec_0
    - r-tidyr 1.3.0 r43h884c59f_0
    - r-tidyselect 1.2.0 r43h6115d3f_0
    - r-tinytex 0.48 r43h142f84f_0
    - r-utf8 1.2.4 r43h76d94ec_0
    - r-uwot 0.1.16 r43h884c59f_0
    - r-vctrs 0.6.4 r43h884c59f_0
    - r-viridislite 0.4.2 r43h6115d3f_0
    - r-withr 2.5.1 r43h6115d3f_0
    - r-xfun 0.40 r43h76d94ec_0
    - r-xtable 1.8_4 r43h6115d3f_0
    - r-yaml 2.3.7 r43h76d94ec_0
    - r-zoo 1.8_12 r43h76d94ec_0
    - readline 8.2 h5eee18b_0
    - sqlite 3.41.2 h5eee18b_0
    - sysroot_linux-64 2.17 h57e8cba_10
    - tk 8.6.12 h1ccaba5_0
    - tktable 2.10 h14c3975_0
    - tzdata 2023c h04d1e81_0
    - xz 5.4.2 h5eee18b_0
    - zlib 1.2.13 h5eee18b_0
    - zstd 1.5.5 hc292b87_0
  run:
    - libgcc-ng >=11.2.0
    - libstdcxx-ng >=11.2.0
    - r-base >=4.3,<4.4.0a0
    - r-cluster
    - r-cowplot
    - r-fitdistrplus
    - r-future
    - r-future.apply
    - r-ggplot2 >=3.3.0
    - r-ggrepel
    - r-ggridges
    - r-httr
    - r-ica
    - r-igraph
    - r-irlba
    - r-jsonlite
    - r-kernsmooth
    - r-leiden >=0.3.1
    - r-lmtest
    - r-mass
    - r-matrix >=1.5_0
    - r-matrixstats
    - r-miniui
    - r-patchwork
    - r-pbapply
    - r-plotly >=4.9.0
    - r-png
    - r-progressr
    - r-purrr
    - r-rann
    - r-rcolorbrewer
    - r-rcpp >=1.0.7
    - r-rcppannoy >=0.0.18
    - r-rcppeigen
    - r-rcppprogress
    - r-reticulate
    - r-rlang
    - r-rocr
    - r-rtsne
    - r-scales
    - r-scattermore >=1.2
    - r-sctransform >=0.4.0
    - r-seuratobject >=4.1.4
    - r-shiny
    - r-spatstat.explore
    - r-spatstat.geom
    - r-tibble
    - r-uwot >=0.1.14
test:
  commands:
    - $R -e "library('Seurat')"
about:
  home: https://satijalab.org/seurat, https://github.com/satijalab/seurat
  license: MIT
  license_family: MIT
  license_file:
    - /workspace/croot/r-seurat_1699202215284/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehol/lib/R/share/licenses/MIT
    - LICENSE
  summary: A toolkit for quality control, analysis, and exploration of single cell
    RNA sequencing data. 'Seurat' aims to enable users to identify and interpret sources
    of heterogeneity from single cell transcriptomic measurements, and to integrate
    diverse types of single cell data. See Satija R, Farrell J, Gennert D, et al (2015)
    <doi:10.1038/nbt.3192>, Macosko E, Basu A, Satija R, et al (2015) <doi:10.1016/j.cell.2015.05.002>,
    Stuart T, Butler A, et al (2019) <doi:10.1016/j.cell.2019.05.031>, and Hao, Hao,
    et al (2020) <doi:10.1101/2020.10.12.335331> for more details.
extra:
  copy_test_source_files: true
  final: true
