overlap_data {ABC.RAP} | R Documentation |
This function overlaps the results from both Student’s t-test and delta beta analyses to identify probes (CpG sites) that are highly and significantly different between cases and controls.
overlap_data(x, y)
x |
Results from t-test or delta beta analyses |
y |
Results from t-test or delta beta analyses |
data(test_data) data(nonspecific_probes) data(annotation_file) test_data_filtered <- filter_data(test_data) test_data_ttest <- ttest_data(test_data_filtered, 1, 2, 3, 4, 1e-3) test_data_delta_beta <- delta_beta_data(test_data_filtered, 1, 2, 3, 4, 0.5, -0.5, 0.94, 0.06) test_overlapped_data <- overlap_data(test_data_ttest, test_data_delta_beta)