GSEs.test {COCONUT} | R Documentation |
A list of lists, specifically, a list of three data objects (GSEs) from the NIH GEO repository. Each has been converted from a probe matrix to a gene matrix, and subsetted to have only 10 samples (5 healthy and 5 diseased) with only 2000 genes.
data(GSEs.test)
A list of lists. Within the list, each named object consists of:
genes
a numeric matrix, gene names in rows and sample IDs in columns.
pheno
a data.frame, with sample IDs in rows and phenotype variables in columns.
The data all come from the NIH GEO repository, and are subsets of their respective GSE IDs.
http://www.ncbi.nlm.nih.gov/geo/
## see help(COCONUT) for further example data(GSEs.test) str(GSEs.test)