plot.ETdiagnosis {EcoTroph} | R Documentation |
This function enables the creation of the principle graphics resulting from the create.ETdiagnosis function.
## S3 method for class 'ETdiagnosis' plot(x,scale=NULL,maxrange=NULL,legend.cex=NULL,ask=interactive(),...)
x |
is the list object returned by the create.ETdiagnosis function. |
scale |
is the scale parameter of the Biomass Trophic Spectra, can be log or by default the standard scale of results. |
maxrange |
is the maximum TL wanted for the x-axis. By default maxrange = 5.5. |
legend.cex |
defines the value of the cex for the legend. |
ask |
default value is interactive. Parameter used to enable the user to control the display of each graph. |
... |
plot other arguments |
The scale parameter controls the scale of the BTS y-axis, it corresponds by default to the scale of results, but it's usually more practical to use a log scale.
The function returns the principal plots of the global ET-Diagnosis routine: the graphics of the biomass, accessible biomass...rates for the different effort multipliers, the Biomass Trophic Spectra (BTS) for the different effort multipliers, the B/Bref(mE=1) and Y/Yref graphs for the main TL classes and the Catch Trophic Spectra (CTS) (global and per fleet).
Colleter Mathieu, Guitton Jerome and Gatti Paul.
data(ecopath_guinee) diagn.list<-create.ETdiagnosis(create.ETmain(ecopath_guinee),same.mE=TRUE) plot(diagn.list)