# Marker-Based Estimation of Heritability Using Individual Plant or Plot Data

## Documentation for package ‘heritability’ version 1.2

- DESCRIPTION file.

## Help Pages

heritability-package | Marker-Based Estimation of Heritability Using Individual Plant or Plot Data.
BT_LW_H | Bolting time and leaf width for the Arabidopsis hapmap population.
floweringTime | Flowering time data taken from Atwell _et al._ (2010).
heritability | Marker-Based Estimation of Heritability Using Individual Plant or Plot Data.
K_atwell | Marker-based relatedness matrices for 3 populations of Arabidopsis thaliana.
K_hapmap | Marker-based relatedness matrices for 3 populations of Arabidopsis thaliana.
K_swedish | Marker-based relatedness matrices for 3 populations of Arabidopsis thaliana.
LA_H | _Arabidopsis_ leaf area data for the hapmap and Swedish regmap population.
LA_S | _Arabidopsis_ leaf area data for the hapmap and Swedish regmap population.
LD | Flowering time data taken from Atwell _et al._ (2010).
LDV | Flowering time data taken from Atwell _et al._ (2010).
leafArea | _Arabidopsis_ leaf area data for the hapmap and Swedish regmap population.
marker_h2 | Compute a marker-based estimate of heritability, given phenotypic observations at individual plant or plot level.
marker_h2_means | Compute a marker-based estimate of heritability, given genotypic means.
means_floweringTime | Flowering time from Atwell _et al._ (2010): accession means.
means_LD | Flowering time from Atwell _et al._ (2010): accession means.
means_LDV | Flowering time from Atwell _et al._ (2010): accession means.
repeatability | ANOVA-based estimates of repeatability
R_matrix | Covariance matrix of the accession means for flowering time.
R_matrix_LD | Covariance matrix of the accession means for flowering time.
R_matrix_LDV | Covariance matrix of the accession means for flowering time.