hyperSpec-package	hyperSpec-package
!=,hyperSpec,hyperSpec-method	Comparison
$	extractreplace
$,hyperSpec-method	extractreplace
$<-	extractreplace
$<-,hyperSpec-method	extractreplace
%%,hyperSpec,hyperSpec-method	Arith
%*%	Arith
%*%,hyperSpec,hyperSpec-method	Arith
%*%,hyperSpec,matrix-method	Arith
%*%,matrix,hyperSpec-method	Arith
%/%,hyperSpec,hyperSpec-method	Arith
*,hyperSpec,hyperSpec-method	Arith
+,hyperSpec,hyperSpec-method	Arith
-,hyperSpec,hyperSpec-method	Arith
.cluster.wavelengths	dot-cluster.wavelengths
.collapse.equal	dot-collapse.equal
.DollarNames	dollarnames
.DollarNames,hyperSpec-method	dollarnames
.DollarNames.hyperSpec	dollarnames
.fileio.optional	dot-fileio.optional
.fix_spc_colnames	dot-fix_spc_colnames
.read.spe.header	read.spe
.read.spe.xml	dot-read.spe.xml
.read.spe.xml_string	dot-read.spe.xml_string
.spc_io_postprocess_optional	Future-functions
.wl_fix_unit_name	Future-functions
/,hyperSpec,hyperSpec-method	Arith
<,hyperSpec,hyperSpec-method	Comparison
<=,hyperSpec,hyperSpec-method	Comparison
==,hyperSpec,hyperSpec-method	Comparison
>,hyperSpec,hyperSpec-method	Comparison
>=,hyperSpec,hyperSpec-method	Comparison
abs,hyperSpec-method	math
acos,hyperSpec-method	math
acosh,hyperSpec-method	math
aggregate	aggregate
aggregate,hyperSpec-method	aggregate
all,hyperSpec-method	summary
all.equal	Comparison
all.equal,hyperSpec,hyperSpec-method	Comparison
all_wl	summary
alois.palette	palettes
any,hyperSpec-method	summary
any_wl	summary
apply	apply
apply,hyperSpec-method	apply
Arith	Arith
Arith,hyperSpec,hyperSpec-method	Arith
Arith,hyperSpec,matrix-method	Arith
Arith,hyperSpec,missing-method	Arith
Arith,hyperSpec,numeric-method	Arith
Arith,hyperSpec-method	Arith
Arith,matrix,hyperSpec-method	Arith
Arith,numeric,hyperSpec-method	Arith
as.character	show
as.character,hyperSpec-method	show
as.data.frame	asdataframe
as.data.frame,hyperSpec-method	asdataframe
as.data.frame.hyperSpec	asdataframe
as.hyperSpec	as.hyperSpec
as.hyperSpec,data.frame-method	as.hyperSpec
as.hyperSpec,matrix-method	as.hyperSpec
as.long.df	asdataframe
as.matrix	asdataframe
as.matrix,hyperSpec-method	asdataframe
as.matrix.hyperSpec	asdataframe
as.t.df	asdataframe
as.wide.df	asdataframe
asin,hyperSpec-method	math
asinh,hyperSpec-method	math
assert_hyperSpec	Future-functions
atan,hyperSpec-method	math
atanh,hyperSpec-method	math
ave,hyperSpec-method	aggregate
barbiturates	barbiturates
bind	bind
cbind.hyperSpec	bind
cbind2,hyperSpec,hyperSpec-method	bind
cbind2,hyperSpec,missing-method	bind
ceiling,hyperSpec-method	math
chk.hy	chk.hy
chondro	chondro
collapse	collapse
collapse.hyperSpec	collapse
colMeans,hyperSpec-method	colSums
colmix.rgb	qplotmix
colnames	dimnames
colnames,hyperSpec-method	dimnames
colnames<-	dimnames
colnames<-,hyperSpec-method	dimnames
colSums	colSums
colSums,hyperSpec-method	colSums
Compare,hyperSpec,hyperSpec-method	Comparison
Compare,hyperSpec,matrix-method	Comparison
Compare,hyperSpec,numeric-method	Comparison
Compare,hyperSpec-method	Comparison
Compare,matrix,hyperSpec-method	Comparison
Compare,numeric,hyperSpec-method	Comparison
Comparison	Comparison
cos,hyperSpec-method	math
cosh,hyperSpec-method	math
count_lines	count_lines
cov,hyperSpec,missing-method	cov
create	initialize
create,hyperSpec-method	initialize
cummax,hyperSpec-method	math
cummin,hyperSpec-method	math
cumprod,hyperSpec-method	math
cumsum,hyperSpec-method	math
decomposition	decomposition
digamma,hyperSpec-method	math
dim,hyperSpec-method	dim
dimnames	dimnames
dimnames,hyperSpec-method	dimnames
droplevels,hyperSpec-method	droplevels-hyperSpec-method
empty	empty
ev2freq	wlconv
ev2invcm	wlconv
ev2nm	wlconv
ev2raman	wlconv
exp,hyperSpec-method	math
expm1,hyperSpec-method	math
export	textio
fitraster	makeraster
floor,hyperSpec-method	math
flu	flu
freq2ev	wlconv
freq2invcm	wlconv
freq2nm	wlconv
freq2raman	wlconv
Future-functions	Future-functions
gamma,hyperSpec-method	math
guess.wavelength	guess.wavelength
hy.getOption	options
hy.getOptions	options
hy.setOptions	options
hy.unittest	unittests
hyperSpec-class	hyperSpec-class
hy_get_option	Future-functions
hy_set_options	Future-functions
i2wl	wl2i
import	textio
initialize	initialize
initialize,hyperSpec-method	initialize
invcm2ev	wlconv
invcm2freq	wlconv
invcm2nm	wlconv
invcm2raman	wlconv
is.na,hyperSpec-method	summary
isample	sample
labels,hyperSpec-method	labels
labels<-	labels
labels<-,hyperSpec-method	labels
laser	laser
legendright	qplotmix
length,hyperSpec-method	dim
levelplot,formula,hyperSpec-method	levelplot
levelplot,hyperSpec,missing-method	levelplot
lgamma,hyperSpec-method	math
log	math
log,hyperSpec-method	math
log1p,hyperSpec-method	math
makeraster	makeraster
map.identify	levelplot
map.sel.poly	map-sel-poly
mark.dendrogram	mark.dendrogram
markpeak	markpeak
Math	math
Math,hyperSpec-method	math
Math2	math
Math2,hyperSpec-method	math
matlab.dark.palette	palettes
matlab.palette	palettes
max,hyperSpec-method	summary
mean,hyperSpec-method	mean_sd
mean_pm_sd	mean_sd
mean_pm_sd,hyperSpec-method	mean_sd
mean_pm_sd,matrix-method	mean_sd
mean_pm_sd,numeric-method	mean_sd
mean_sd	mean_sd
mean_sd,hyperSpec-method	mean_sd
mean_sd,matrix-method	mean_sd
mean_sd,numeric-method	mean_sd
merge	merge
merge,data.frame,hyperSpec-method	merge
merge,hyperSpec,data.frame-method	merge
merge,hyperSpec,hyperSpec-method	merge
min,hyperSpec-method	summary
ncol,hyperSpec-method	dim
new	initialize
new,hyperSpec-method	initialize
nm2ev	wlconv
nm2freq	wlconv
nm2invcm	wlconv
nm2raman	wlconv
normalize.colrange	qplotmix
normalize.minmax	qplotmix
normalize.null	qplotmix
normalize.range	qplotmix
normalize01	normalize01
normalize01,hyperSpec-method	normalize01
normalize01,matrix-method	normalize01
normalize01,numeric-method	normalize01
nrow,hyperSpec-method	dim
nwl	dim
Operators	Comparison
orderwl	orderwl
paracetamol	paracetamol
pearson.dist	pearson.dist
plot	plot
plot,ANY,ANY-method	plot
plot,hyperSpec,character-method	plot
plot,hyperSpec,missing-method	plot
plot-methods	plot
plotc	plotc
plotmap	levelplot
plotmat	plotmat
plotspc	plotspc
plotvoronoi	levelplot
pooled.cov	cov
print	show
print,hyperSpec-method	show
prod,hyperSpec-method	summary
qmixlegend	qplotmix
qmixtile	qplotmix
qplotc	qplotc
qplotmap	qplotmap
qplotmixmap	qplotmixmap
qplotspc	qplotspc
quantile,hyperSpec-method	mean_sd
quickdf	quickdf
raman2ev	wlconv
raman2freq	wlconv
raman2invcm	wlconv
raman2nm	wlconv
range,hyperSpec-method	summary
rbind.fill	rbind.fill
rbind.fill.matrix	rbind.fill
rbind.hyperSpec	bind
rbind2,hyperSpec,hyperSpec-method	bind
rbind2,hyperSpec,missing-method	bind
read.asc.Andor	read.asc.Andor
read.asc.PerkinElmer	read.asc.PerkinElmer
read.cytomat	read.mat.Cytospec
read.dat.Witec	read.txt.Witec
read.ENVI	read.ENVI
read.ENVI.HySpex	read.ENVI
read.ENVI.Nicolet	read.ENVI
read.ini	read-ini
read.jdx	read.jdx
read.mat.Cytospec	read.mat.Cytospec
read.spc	read-spc
read.spc.Kaiser	read-spc-Kaiser
read.spc.KaiserLowHigh	read-spc-Kaiser
read.spc.KaiserMap	read-spc-Kaiser
read.spe	read.spe
read.txt.Horiba	read.txt.Horiba
read.txt.Horiba.t	read.txt.Horiba
read.txt.Horiba.xy	read.txt.Horiba
read.txt.long	textio
read.txt.Renishaw	read.txt.Renishaw
read.txt.Shimadzu	read.txt.Shimadzu
read.txt.wide	textio
read.txt.Witec	read.txt.Witec
read.txt.Witec.Graph	read.txt.Witec
read.zip.Renishaw	read.txt.Renishaw
read_txt_long	Future-functions
read_txt_wide	Future-functions
rmmvnorm	rmmvnorm
rmmvnorm,hyperSpec-method	rmmvnorm
rmmvnorm,numeric,hyperSpec,array-method	rmmvnorm
rmmvnorm,numeric,hyperSpec,matrix-method	rmmvnorm
rmmvnorm,numeric,matrix,array-method	rmmvnorm
rmmvnorm,numeric,matrix,matrix-method	rmmvnorm
round,hyperSpec-method	math
rowMeans,hyperSpec-method	colSums
rownames	dimnames
rownames,hyperSpec-method	dimnames
rownames<-	dimnames
rownames<-,hyperSpec-method	dimnames
rowSums,hyperSpec-method	colSums
sample,data.frame-method	sample
sample,hyperSpec-method	sample
sample,matrix-method	sample
scale	scale
scale,hyperSpec-method	scale
scale-methods	scale
scan.asc.Andor	read.asc.Andor
scan.dat.Witec	read.txt.Witec
scan.txt.Renishaw	read.txt.Renishaw
scan.txt.Witec	read.txt.Witec
scan.txt.Witec.Graph	read.txt.Witec
scan.zip.Renishaw	read.txt.Renishaw
sel.poly	map-sel-poly
seq	seq
seq,hyperSpec-method	seq
seq.hyperSpec	seq
show	show
show,hyperSpec-method	show
sign,hyperSpec-method	math
signif,hyperSpec-method	math
sin,hyperSpec-method	math
sinh,hyperSpec-method	math
spc.bin	spc-bin
spc.fit.poly	baselines
spc.fit.poly.below	baselines
spc.identify	spc-identify
spc.label.default	spc-identify
spc.label.wlonly	spc-identify
spc.loess	spc-loess
spc.NA.approx	spc.NA.approx
spc.NA.linapprox	spc.NA.approx
spc.point.default	spc-identify
spc.point.max	spc-identify
spc.point.min	spc-identify
spc.point.sqr	spc-identify
spc.rubberband	spc-rubberband
spc.smooth.spline	spc-spline
spe.showcalpoints	read.spe
split	split
split,ANY-method	split
split,hyperSpec-method	split
split-methods	split
sqrt,hyperSpec-method	math
stacked.offsets	plotspc
subset	subset
subset,hyperSpec-method	subset
sum,hyperSpec-method	summary
Summary	summary
summary	show
Summary,hyperSpec-method	summary
summary,hyperSpec-method	show
sweep	sweep
sweep,hyperSpec-method	sweep
sweep-methods	sweep
tan,hyperSpec-method	math
tanh,hyperSpec-method	math
trellis.factor.key	trellis.factor.key
trigamma,hyperSpec-method	math
trunc,hyperSpec-method	math
validObject	chk.hy
validObject,hyperSpec-method	chk.hy
vanderMonde	vanderMonde
vanderMonde,hyperSpec-method	vanderMonde
wc	wc
wl	wl
wl.eval	wl.eval
wl2i	wl2i
wl<-	wl
wlconv	wlconv
wl_convert_units	Future-functions
write.txt.long	textio
write.txt.wide	textio
[	extractreplace
[,hyperSpec-method	extractreplace
[<-	extractreplace
[<-,hyperSpec-method	extractreplace
[[	extractreplace
[[,hyperSpec-method	extractreplace
[[<-	extractreplace
[[<-,hyperSpec-method	extractreplace
^,hyperSpec,hyperSpec-method	Arith
