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| csv2list | Convert metabolite set / csv to list |
| list2xml | Convert metabolite set / list to XML format |
| msea_ora | MSEA by over representation analysis |
| msea_sub | MSEA by Subramanian et al. |
| pathway_class | Convert metabolite set (multiple) / tar.gz to list |
| pca_scaled | PCA for autoscaled data |
| read_pathway | Read metabolite set file (*.xml) |
| setlabel | Generate binary label matrix of metabolite set |