Tools for Quantitative Genetics Data Analyses


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Documentation for package ‘qgtools’ version 1.0

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qgtools-package Tools for Quantitative Genetics Analyses
ad.mq Additive-dominance (AD) model with MINQUE analysis
ad.mq.jack Additive-dominance (AD) model with MINQUE analysis and jackknife
ad.reml Additive-dominance (AD) model with REML analysis
ad.reml.jack AD model with REML analysis and jackknife resampling test
ad.simu An R function for AD model simulation.
ad.simu.jack An R function for AD model simulation
ad.simudata An R function to generate an AD model simulated data set
ad4.mq Additive-dominance (AD) model with MINQUE analysis for multi-parent mating designs
ad4.mq.jack Additive-dominance (AD) model, multi-parent mating designs, MINQUE, and jackknife
ad4.reml Additive-dominance (AD) model with REML analysis for multi-parent mating designs
ad4.reml.jack Additive-dominance (AD) model, multi-parent mating designs, REML, and jackknife
adaa.mq ADAA model with MINQUE analysis
adaa.mq.jack ADAA model with MINQUE and jacknife analyses
adaa.reml Additive-dominance (AD) with additive-additive interaction model with REML analysis
adaa.reml.jack ADAA model with REML and jacknife analyses
adaa.simu An R function for AD model simulation.
adaa.simu.jack An R function for AD model simulation
adaa.simudata An R function to generate an ADAA model simulated data set
adc.mq An ADC with MINQUE analysis
adc.mq.jack An ADC model with MINQUE analyses and jackknife tests
adc.reml ADC model with REML analysis
adc.reml.jack ADC model with REML analysis and jackknife resampling test
adc.simu An R function for ADC model simulation.
adc.simu.jack An R function for ADC model simulation
adc.simudata An R function to generate an ADC model simulated data set
adc4.mq ADC model with MINQUE analysis for multi-parent mating designs
adc4.mq.jack ADC model, multi-parent mating designs, MINQUE, and jackknife
adc4.reml ADC model with REML analysis for multi-parent mating designs
adc4.reml.jack ADC model, multi-parent mating designs, REML, and jackknife
adm.mq An ADM model with MINQUE analysis
adm.mq.jack ADM model awith MINQUE analysis and jackknife test
adm.reml ADM model with REML analysis
adm.reml.jack ADM model awith REML analysis and jackknife test
adm.simu An R function for ADM model simulation.
adm.simu.jack An R function for ADM model simulation
adm.simudata An R function to generate an ADM model simulated data set
adrc.mq AD model with row and column effects
adrc.mq.jack AD model with row and column effects analyzed by MINQUE and jackknife
adrc.reml AD model with row and column effects analyzed by REML approach
adrc.reml.jack AD model with row and column effects analyzed by MINQUE and jackknife
adrcdat F2 spring wheat data with row and column
cotf12 Cotton F1 and F2 data
cotf2 A cotton F2 data set from a 2*6 factorial genetic mating design.
maize Maize variety trial
qgtools Tools for Quantitative Genetics Analyses
stab.fw Resgression based stability analysis
stab.mean Group mean and rank calculator
stab.var Within-group variance calculation with resampling techniques
wheat Multi-parental mating design data