Joint Analysis of Genotype and Group-Specific Variability Using a Novel Score Test Approach to Map Expression Quantitative Trait Loci (eQTL)

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Documentation for package ‘JAGUAR’ version 3.0.1

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JAGUAR-package Joint analysis of genotype and group-specific variability using a novel score test to map eQTL
cis_eqtl An internal C++ function
GENEapply An internal C++ function
jagSIM An internal C++ function
jaguar_cis Perform cis-eQTL analysis
jaguar_example Simulated multi-tissue eQTL data
jaguar_gwa Perform genome-wide analysis
jaguar_plotqtl Plotting the eQTL results
jaguar_process Obtain significant gene-SNP pairs based on a predetermined threshold value
jaguar_sim Run null or power simulations
jaguar_slice Slice gene expression data into multiple partitions
jag_fun An internal C++ function
rowsumscpp An internal C++ function
vcSIM An internal C++ function