simecol-package	simecol-package
$	modelFit-methods
$,modelFit-method	modelFit-methods
addtoenv	addtoenv
alpha2rho	pcuseries
approxTime	approxTime
approxTime1	approxTime
as.list,simObj-method	as.simObj
as.simObj	as.simObj
as.simObj,list-method	as.simObj
CA	CA
chemostat	chemostat
coef,modelFit-method	modelFit-methods
coerce,list,simObj-method	as.simObj
coerce,simObj,list-method	as.simObj
conway	conway
deviance,modelFit-method	modelFit-methods
diffusion	diffusion
editInit	editParms
editInit,simObj-method	editParms
editInit-methods	editParms
editParms	editParms
editParms,simObj-method	editParms
editParms-methods	editParms
editTimes	editParms
editTimes,simObj-method	editParms
editTimes-methods	editParms
eightneighbors	eightneighbours
eightneighbours	eightneighbours
equations	parms
equations,simObj-method	parms
equations-methods	parms
equations<-	parms
equations<-,simObj-method	parms
equations<--methods	parms
fitOdeModel	fitOdeModel
fromtoby	fromtoby
functionOrcharacter-class	listOrNULL
functionOrNULL-class	listOrNULL
gridModel	odeModel
gridModel-class	simecol-package
indbasedModel	odeModel
indbasedModel-class	simecol-package
init	parms
init,simObj-method	parms
init-methods	parms
init<-	parms
init<-,gridModel,ANY-method	parms
init<-,gridModel,matrix-method	parms
init<-,simObj,ANY-method	parms
init<--methods	parms
initfunc	parms
initfunc,simObj-method	parms
initfunc-methods	parms
initfunc<-	parms
initfunc<-,simObj-method	parms
initfunc<--methods	parms
initialize,simObj-method	initialize-methods
initialize-methods	initialize-methods
inputs	parms
inputs,simObj-method	parms
inputs-methods	parms
inputs<-	parms
inputs<-,simObj-method	parms
inputs<--methods	parms
iteration	iteration
iteration,gridModel-method	iteration
iteration,numeric-method	iteration
iteration,odeModel-method	iteration
iteration,simObj-method	iteration
iteration-methods	iteration
listOrdata.frame-class	listOrNULL
listOrNULL-class	listOrNULL
lv	lv
lv3	lv3
main	parms
main,simObj-method	parms
main-methods	parms
main<-	parms
main<-,simObj-method	parms
main<--methods	parms
mixNamedVec	mixNamedVec
modelFit-class	modelFit
neighbors	neighbours
neighbours	neighbours
numericOrlist-class	listOrNULL
observer	observer
observer,simObj-method	observer
observer-methods	observer
observer<-	observer
observer<-,simObj-method	observer
observer<--methods	observer
odeModel	odeModel
odeModel-class	simecol-package
out	parms
out,gridModel-method	parms
out,odeModel-method	parms
out,simObj-method	parms
out-methods	parms
out<-	parms
out<-,simObj-method	parms
out<--methods	parms
p.constrain	p.constrain
p.unconstrain	p.constrain
parms	parms
parms,simObj-method	parms
parms-methods	parms
parms<-	parms
parms<-,simObj-method	parms
parms<--methods	parms
pcu	pcuseries
pcuseries	pcuseries
peaks	peaks
plot,ANY,ANY-method	plot-methods
plot,gridModel,missing-method	plot-methods
plot,odeModel,missing-method	plot-methods
plot,odeModel,odeModel-method	plot-methods
plot,rwalkModel,missing-method	plot-methods
plot,simObj,missing-method	plot-methods
plot-methods	plot-methods
print,ANY-method	print-methods
print,simObj-method	print-methods
print-methods	print-methods
rho2alpha	pcuseries
rwalkModel	odeModel
rwalkModel-class	simecol-package
sEdit	sEdit
seedfill	seedfill
show,simObj-method	print-methods
sim	sim
sim,gridModel-method	sim
sim,odeModel-method	sim
sim,simObj-method	sim
sim-methods	sim
simecol	simecol-package
simObj	simecol-package
simObj-class	simecol-package
solver	parms
solver,simObj-method	parms
solver-methods	parms
solver<-	parms
solver<-,simObj-method	parms
solver<--methods	parms
ssqOdeModel	ssqOdeModel
summary,modelFit-method	modelFit-methods
times	parms
times,simObj-method	parms
times-methods	parms
times<-	parms
times<-,simObj-method	parms
times<--methods	parms
upca	upca
[	modelFit-methods
[,modelFit-method	modelFit-methods
[[	modelFit-methods
[[,modelFit-method	modelFit-methods
