acfCSP {AnaCoDa} | R Documentation |
The function calculates and by defaults plots the acf and estimates the autocorrelation in the trace
acfCSP(parameter, csp = "Mutation", numMixtures = 1, samples = NULL, lag.max = 40, plot = TRUE)
parameter |
object of class Parameter |
csp |
"Selection" or "Mutation", defaults to "Mutation" |
numMixtures |
indicates the number of CSP mixtures used |
samples |
number of samples at the end of the trace used to calculate the acf |
lag.max |
Maximum amount of lag to calculate acf. Default is 10*log10(N), where N i the number of observations. |
plot |
logical. If TRUE (default) a plot of the acf is created |