perm_pvalues {ARTP}R Documentation

Permutation p-values

Description

Sample file of permutation p-values for the example in ARTP_pathway

Details

This is a comma delimited file with 101 rows with row 1 containing the SNP ids, and rows 2-101 containing the p-values. Each row represents one permutation.

Examples

# Read in and print the data
  f <- system.file("sampleData", "perm_pvalues.txt", package="ARTP")
  x <- scan(f, what="character", sep="\n")
  substring(x[1:5], 1, 50)

[Package ARTP version 2.0.5 Index]