Density Estimation for Grouped Data


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Documentation for package ‘bda’ version 10.1.9

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B C D E F G H L M N O P Q R S Z

bda-package Binned Data Analysis

-- B --

BCUSUM Cumulative Sum Control Chart.
bcusum Cumulative Sum Control Chart.
bde Density Estimation for Binned Data
bde.bdata Density Estimation for Binned Data
bde.default Density Estimation for Binned Data
bde.histogram Density Estimation for Binned Data
bin.NGS Bin NGS data
binning Data Binning
binning.default Data Binning
binning.histogram Data Binning

-- C --

CCUSUM Cumulative Sum Control Chart.
ccusum Cumulative Sum Control Chart.
cdf.NGS.nmix Fit a Normal Mixture Model to binned NGS data
cdf.nmix Fit a Normal Mixture Model to binned data
compare Compare two or more samples
compare.data.frame Compare two or more samples
compare.default Compare two or more samples
compare.matrix Compare two or more samples
cusum Cumulative Sum Control Chart.
cusum.default Cumulative Sum Control Chart.

-- D --

Dagum The Dagum Distribution
ddagum The Dagum Distribution
deg.NGS A test of DEG detection
dewd The Exponentiated Weibull Distribution
dgbeta Generalized Beta Distribution
dgld The mixed normal distribution
dgwd The Exponentiated Weibull Distribution
dlap The Laplace (Double Exponential) Distribution
dmixnorm The mixed normal distribution

-- E --

eda Exploratory Data Analysis (EDA)
eda.data.frame Exploratory Data Analysis (EDA)
eda.default Exploratory Data Analysis (EDA)
eda.matrix Exploratory Data Analysis (EDA)
ewd The Exponentiated Weibull Distribution

-- F --

fit.Dagum The Dagum Distribution
fit.GB Fitting GB
fit.GLD Fitting FMKL GLD
fit.GLD.FMKL Fitting FMKL GLD
fit.lognormal Fit a log-normal distribution to (binned) NGS data
fit.mixnorm Fit a Normal Mixture Model to binned data
fit.mixnorm.bdata Fit a Normal Mixture Model to binned data
fit.mixnorm.default Fit a Normal Mixture Model to binned data
fit.mixnorm.histogram Fit a Normal Mixture Model to binned data
fit.NGS Fit a Normal Mixture Model to binned NGS data
fit.nmix.copula Fit a Bivariate Copula Based on Normal Mixture Model for NGS data
fit.Weibull Two-parameter Weibull Distribution Maximum Likelihood Estimation
fit.Weibull.bdata Two-parameter Weibull Distribution Maximum Likelihood Estimation
fit.Weibull.default Two-parameter Weibull Distribution Maximum Likelihood Estimation
fit.Weibull.histogram Two-parameter Weibull Distribution Maximum Likelihood Estimation
fitlap The Laplace (Double Exponential) Distribution
fmkl The mixed normal distribution

-- G --

GB Generalized Beta Distribution
gld The mixed normal distribution
gof Goodness of fit test
gof.bdata Goodness of fit test
gof.default Goodness of fit test
gof.FMKL Goodness of fit test
gof.GB Goodness of fit test
gof.histogram Goodness of fit test
gwd The Exponentiated Weibull Distribution

-- H --

hhi Mobile 2010 Household income

-- L --

ld50.logit Predict Doses for Binomial Assay model (using counts)
ld50.logitfit Predict Doses for Binomial Assay model (using counts)
lines.Dagum The Dagum Distribution
lines.FMKL Fitting FMKL GLD
lines.GB Fitting GB
lines.GWD Two-parameter Weibull Distribution Maximum Likelihood Estimation
lines.histosmooth Density Estimation for Binned Data
lines.ld50 Predict Doses for Binomial Assay model (using counts)
lines.MetaMeans Test Equal Means
lines.NGS.nmix Fit a Normal Mixture Model to binned NGS data
lines.nmix Fit a Normal Mixture Model to binned data
lines.smooth non-parametric regression
lps.variance compute the variance of the local polynomial regression function
lpsmooth non-parametric regression
lpsmooth.bdata non-parametric regression
lpsmooth.default non-parametric regression
lpsmooth.histogram non-parametric regression

-- M --

mediation.test The Sobel mediation test
metamean.test Test Equal Means

-- N --

normalize.NGS To normalize a NGS profile using the mixture model method

-- O --

oddsratio Odds Ratio and Relative Risk
oddsratio.data.frame Odds Ratio and Relative Risk
oddsratio.default Odds Ratio and Relative Risk
oddsratio.matrix Odds Ratio and Relative Risk
ofc occipitofrontal head circumference data

-- P --

pdagum The Dagum Distribution
pdf.NGS.nmix Fit a Normal Mixture Model to binned NGS data
pdf.nmix Fit a Normal Mixture Model to binned data
perm.test.NGS A permutation test for DEG detection
pewd The Exponentiated Weibull Distribution
pgbeta Generalized Beta Distribution
pgld The mixed normal distribution
pgwd The Exponentiated Weibull Distribution
plap The Laplace (Double Exponential) Distribution
plot.BCUSUM Cumulative Sum Control Chart.
plot.bdata Data Binning
plot.broc Receiver operating characteristic (ROC)
plot.CCUSUM Cumulative Sum Control Chart.
plot.Dagum The Dagum Distribution
plot.desc Exploratory Data Analysis (EDA)
plot.FMKL Fitting FMKL GLD
plot.GB Fitting GB
plot.GWD Two-parameter Weibull Distribution Maximum Likelihood Estimation
plot.histosmooth Density Estimation for Binned Data
plot.ld50 Predict Doses for Binomial Assay model (using counts)
plot.MetaMeans Test Equal Means
plot.NGS.hist Bin NGS data
plot.NGS.lognormal Fit a log-normal distribution to (binned) NGS data
plot.NGS.nmix Fit a Normal Mixture Model to binned NGS data
plot.NGS.nmix.copula Fit a Bivariate Copula Based on Normal Mixture Model for NGS data
plot.NGS.test A test of DEG detection
plot.nmix Fit a Normal Mixture Model to binned data
plot.smooth non-parametric regression
pmixnorm The mixed normal distribution
ppower Compute the power of an ANOVA-type test for proportions
print.BCUSUM Cumulative Sum Control Chart.
print.BD occipitofrontal head circumference data
print.bdata Data Binning
print.broc Receiver operating characteristic (ROC)
print.CCUSUM Cumulative Sum Control Chart.
print.comp Compare two or more samples
print.Dagum The Dagum Distribution
print.desc Exploratory Data Analysis (EDA)
print.FMKL Fitting FMKL GLD
print.GB Fitting GB
print.GWD Two-parameter Weibull Distribution Maximum Likelihood Estimation
print.histosmooth Density Estimation for Binned Data
print.ld50 Predict Doses for Binomial Assay model (using counts)
print.MetaMeans Test Equal Means
print.NGS.hist Bin NGS data
print.NGS.lognormal Fit a log-normal distribution to (binned) NGS data
print.NGS.nmix Fit a Normal Mixture Model to binned NGS data
print.NGS.nmix.copula Fit a Bivariate Copula Based on Normal Mixture Model for NGS data
print.NGS.test A test of DEG detection
print.nmix Fit a Normal Mixture Model to binned data
print.odds Odds Ratio and Relative Risk
print.smooth non-parametric regression

-- Q --

qdagum The Dagum Distribution
qewd The Exponentiated Weibull Distribution
qgbeta Generalized Beta Distribution
qgld The mixed normal distribution
qgwd The Exponentiated Weibull Distribution
qlap The Laplace (Double Exponential) Distribution
qmixnorm The mixed normal distribution
quantile.bdata Data Binning

-- R --

Restart Cumulative Sum Control Chart.
Restart.CCUSUM Cumulative Sum Control Chart.
Restart.default Cumulative Sum Control Chart.
rgbeta Generalized Beta Distribution
rgld The mixed normal distribution
rgwd The Exponentiated Weibull Distribution
rlap The Laplace (Double Exponential) Distribution
rmixnorm The mixed normal distribution
robot Robot surgery.
roc Receiver operating characteristic (ROC)

-- S --

summary.NGS.nmix Fit a Normal Mixture Model to binned NGS data

-- Z --

zr occipitofrontal head circumference data