toPajek {BoolNet} | R Documentation |
Exports a network to the Pajek file format to visualize transition trajectories. For more information on Pajek, please refer to http://pajek.imfm.si/doku.php
toPajek(stateGraph, file = "boolean.net", includeLabels=FALSE, ...)
stateGraph |
An object of class |
file |
The name of the output file for Pajek. Defaults to "boolean.net". |
includeLabels |
If set to true, the vertices of the graph in the output file are labeled with the binary encodings of the states. Defaults to FALSE. |
... |
This is only for compatibility with previous versions and should not be used. |
This function has no return value.
getAttractors
, simulateSymbolicModel
, getTransitionTable
, getBasinOfAttraction
, getStateSummary
, toSBML
# load example data data(cellcycle) # get attractors attractors <- getAttractors(cellcycle) # export to Pajek toPajek(attractors, file="pajek_export.net")