# Conformational Manipulations of Protein Atomic Structures

## Documentation for package ‘compas’ version 0.1

- DESCRIPTION file.

## Help Pages

atomdeps | Atom parameters and definitions for side chains
atomtype | Atom Type Table
calCo | Calculate Cartesian coordinates for 1-4 bonded atoms
calscco | Calculate Cartesian coordinates of side chains
dfireE | DFIRE Energy Evaluation for Protein Conformations
nat879 | Sample Protein Conformation 1
pdbrmsd | Root Mean Squared Deviation (RMSD) of Two Protein Conformations
pred879 | Sample Protein Conformation 2
torsion | Calculate dihedral angle formed by four atoms