dimRedMethod-class {dimRed} | R Documentation

## Class "dimRedMethod"

### Description

A virtual class "dimRedMethod" to serve as a template to implement methods for dimensionality reduction.

### Details

Implementations of dimensionality reductions should inherit from this class.

The `fun` slot should be a function that takes three arguments

data

  An object of class `dimRedData`.

pars

  A list with the standard parameters.

keep.org.data

  Logical. If the original data should be kept in the output.

and returns an object of class `dimRedResult`.

The `stdpars` slot should take a list that contains standard parameters for the implemented methods.

This way the method can be called by `embed(data, "method-name", ...)`, where `...` can be used to to change single parameters.

### Slots

`fun`

  A function that does the embedding.

`stdpars`

  A list with the default parameters for the `fun` slot.

### See Also

Other dimensionality reduction methods: `AutoEncoder-class`, `DRR-class`, `DiffusionMaps-class`, `DrL-class`, `FastICA-class`, `FruchtermanReingold-class`, `HLLE-class`, `Isomap-class`, `KamadaKawai-class`, `LLE-class`, `MDS-class`, `NNMF-class`, `PCA-class`, `PCA_L1-class`, `UMAP-class`, `dimRedMethodList`, `kPCA-class`, `nMDS-class`, `tSNE-class`

[Package dimRed version 0.2.2 Index]