geneFrequency.BigBang {galgo} | R Documentation |
Computes the frequency of genes based on chromosomes. It really returns getFrequiences
using the $new
variable, adding gene names, and filtering for cutoff
.
## S3 method for class 'BigBang' geneFrequency(o, filter="none", subset=TRUE, gene.names=TRUE, cutoff=-1, value=c("frequency", "indexes", "ranks"), ...)
filter |
The |
subset |
Second level of filter. |
gene.names |
|
cutoff |
Only genes whose frequency is greather than |
value |
The result. |
A table when value=="frequency"
, otherwise, a vector.
Victor Trevino. Francesco Falciani Group. University of Birmingham, U.K. http://www.bip.bham.ac.uk/bioinf
Goldberg, David E. 1989 Genetic Algorithms in Search, Optimization and Machine Learning. Addison-Wesley Pub. Co. ISBN: 0201157675
For more information see BigBang
.
## Not run: #bb is a BigBang object geneFrequency(bb) ## End(Not run)