computeCount.BigBang {galgo} | R Documentation |
Compute the counts for every gene from a set of chromosomes.
Description
Compute the counts for every gene from a set of chromosomes.
Internal method.
Usage
## S3 method for class 'BigBang'
computeCount(o, filter="none", subset=TRUE, ...)
Arguments
filter |
The BigBang object can save information about solutions that did not reach the goalFitness . filter=="solutions" ensures that only chromosomes that reach the goalFitness are considered. fitlter=="none" take all chromosomes. filter=="nosolutions" consider only no-solutions (for comparative purposes).
|
subset |
Second level of filter. subset can be a vector specifying which filtered chromosomes are used. It can be a logical vector or a numeric vector (indexes in order given by $bestChromosomes in BigBang object variable).
|
Value
counter vector
Author(s)
Victor Trevino. Francesco Falciani Group. University of Birmingham, U.K. http://www.bip.bham.ac.uk/bioinf
See Also
For more information see BigBang
.
[Package
galgo version 1.4
Index]