gclust.rsvt {igraph} | R Documentation |
Performs Clustering of Graphs using Singular Value Thresholding and Non-negative Factorization.
gclust.rsvt(glist, r=1,maxsvt=10,nmfout=FALSE,maxit=10000, nmfmethod='lee')
glist |
List of |
r |
Maximum Number of Clusters Allowed |
maxsvt |
Maximum Number of Singular Value Thresholding; Default is 10 |
nmfout |
T/F indicating if the output from nmf should be returned; Default is FALSE |
maxit |
A number passed to irlba or svd function limiting the number of iteration; Default is 10000 |
nmfmethod |
A number passed to irlba or svd, limiting the number of iterations; Default is 'lee' |
nmf |
An NMF object |
W |
Basis Graphs |
H |
Probability Vector for Cluster Weights timeseries of graphs |
Xorigin |
Input Data in the matrix form |
Nam Lee nhlee@jhu.edu
require(NMF) require(irlba) require(igraph)