gclust.app {igraph}R Documentation

Graph Clustering Using NMF (and no SVT) – Apparent Clusters

Description

Performs Clustering of Graphs using Non-negative Factorization.

Usage

    gclust.app(glist, r=1,nmfout=FALSE,maxit=10000, nmfmethod='lee')

Arguments

glist

List of igraph Objects

r

Maximum Number of Clusters Allowed

nmfout

T/F indicating if the output from nmf should be returned; Default is FALSE

maxit

A number passed to irlba or svd function limiting the number of iteration; Default is 10000

nmfmethod

A number passed to irlba or svd, limiting the number of iterations; Default is 'lee'

Value

nmf

An NMF object

W

Basis Graphs

H

Probability Vector for Cluster Weights timeseries of graphs

Xorigin

Input Data in the matrix form

Author(s)

Nam Lee nhlee@jhu.edu


[Package igraph version 1.1.2 Index]