lme4-package	lme4-package
.makeCC	lmerControl
.prt.aictab	utilities
.prt.call	utilities
.prt.family	utilities
.prt.grps	utilities
.prt.methTit	utilities
.prt.resids	utilities
.prt.VC	utilities
.prt.warn	utilities
.simulateFun	simulate.merMod
anova.merMod	merMod-class
Arabidopsis	Arabidopsis
as.data.frame.thpr	profile-methods
as.data.frame.VarCorr.merMod	VarCorr
as.function.merMod	merMod-class
bootMer	bootMer
cake	cake
cbpp	cbpp
coef.merMod	merMod-class
confint.merMod	confint.merMod
convergence	convergence
cov2sdcor	vcconv
Cv_to_Sv	vcconv
Cv_to_Vv	vcconv
densityplot.thpr	plots.thpr
devcomp	devcomp
deviance.merMod	merMod-class
df.residual.merMod	merMod-class
dotplot.ranef.mer	ranef
drop1.merMod	drop1.merMod
dummy	dummy
Dyestuff	Dyestuff
Dyestuff2	Dyestuff
expandDoubleVerts	expandDoubleVerts
extractAIC.merMod	merMod-class
factorize	factorize
family.merMod	merMod-class
findbars	findbars
fitted.merMod	merMod-class
fixed.effects	fixef
fixef	fixef
fixef.merMod	fixef
formatVC	utilities
formula.merMod	merMod-class
fortify	fortify
fortify.merMod	fortify
getL	getME
getL,merMod-method	getME
getME	getME
getME.merMod	getME
GHrule	GHrule
glFormula	modular
glmer	glmer
glmer.nb	glmer.nb
glmerControl	lmerControl
glmerLaplaceHandle	glmerLaplaceHandle
glmerMod-class	merMod-class
glmFamily	glmFamily
glmFamily-class	glmFamily-class
glmResp	lmResp
glmResp-class	lmResp-class
golden	golden-class
golden-class	golden-class
GQdk	GQdk
GQN	GQdk
grouseticks	grouseticks
grouseticks_agg	grouseticks
hatvalues.merMod	hatvalues.merMod
InstEval	InstEval
isGLMM	isREML
isGLMM.merMod	isREML
isLMM	isREML
isLMM.merMod	isREML
isNested	isNested
isNLMM	isREML
isNLMM.merMod	isREML
isREML	isREML
isREML.merMod	isREML
lFormula	modular
llikAIC	utilities
lme4	lme4-package
lmer	lmer
lmerControl	lmerControl
lmerMod-class	merMod-class
lmerResp	lmResp
lmerResp-class	lmResp-class
lmList	lmList
lmList4-class	lmList4-class
lmResp	lmResp
lmResp-class	lmResp-class
log.thpr	profile-methods
logLik.merMod	merMod-class
logProf	profile-methods
mcmcsamp	pvalues
merMod	merMod-class
merMod-class	merMod-class
merPredD	merPredD
merPredD-class	merPredD-class
methTitle	utilities
mkDataTemplate	mkSimulationTemplate
mkdevfun	mkdevfun
mkGlmerDevfun	modular
mkLmerDevfun	modular
mkMerMod	mkMerMod
mkParsTemplate	mkSimulationTemplate
mkRespMod	mkRespMod
mkReTrms	mkReTrms
mkVarCorr	mkVarCorr
mlist2vec	vcconv
model.frame.merMod	merMod-class
model.matrix.merMod	merMod-class
modular	modular
negative.binomial	glmer.nb
NelderMead	NelderMead-class
NelderMead-class	NelderMead-class
Nelder_Mead	Nelder_Mead
ngrps	ngrps
ngrps.merMod	merMod-class
nlformula	nlformula
nlmer	nlmer
nlmerControl	lmerControl
nlmerMod-class	merMod-class
nlminbwrap	nloptwrap
nloptwrap	nloptwrap
nlsResp	lmResp
nlsResp-class	lmResp-class
nobars	nobars
nobs	merMod-class
nobs.merMod	merMod-class
optimizeGlmer	modular
optimizeLmer	modular
Pastes	Pastes
Penicillin	Penicillin
plot.lmList	lmList
plot.lmList4	plot.lmList4
plot.lmList4.confint	plot.lmList4
plot.merMod	plot.merMod
predict.merMod	predict.merMod
print.merMod	merMod-class
print.summary.merMod	merMod-class
print.VarCorr.merMod	VarCorr
profile-methods	profile-methods
profile.merMod	profile-methods
pvalues	pvalues
qqmath.merMod	plot.merMod
qqmath.ranef.mer	ranef
ranef	ranef
ranef.merMod	ranef
refit	refit
refit.merMod	refit
refitML	refitML
refitML.merMod	refitML
REMLcrit	merMod-class
rePos	rePos
rePos-class	rePos-class
residuals.glmResp	residuals.merMod
residuals.lmResp	residuals.merMod
residuals.merMod	residuals.merMod
sdcor2cov	vcconv
show,lmList4-method	lmList4-class
show,merMod-method	merMod-class
show.merMod	merMod-class
show.summary.merMod	merMod-class
sigma	sigma
sigma.merMod	sigma
simulate.formula	simulate.merMod
simulate.merMod	simulate.merMod
sleepstudy	sleepstudy
splom.thpr	plots.thpr
subbars	subbars
summary.merMod	merMod-class
summary.summary.merMod	merMod-class
Sv_to_Cv	vcconv
terms.merMod	merMod-class
troubleshooting	troubleshooting
update.merMod	merMod-class
updateGlmerDevfun	modular
VarCorr	VarCorr
VarCorr.merMod	VarCorr
varianceProf	varianceProf
vcconv	vcconv
vcov.merMod	merMod-class
vcov.summary.merMod	merMod-class
vec2mlist	vcconv
vec2STlist	vcconv
VerbAgg	VerbAgg
Vv_to_Cv	vcconv
weights.merMod	merMod-class
xyplot.thpr	plots.thpr
||	expandDoubleVerts
