plot,lobo-method {oce} | R Documentation |
Plot LOBO data
Description
Plot a summary diagram for lobo data.
Usage
## S4 method for signature 'lobo'
plot(x, which = c(1, 2, 3), adorn = NULL,
mgp = getOption("oceMgp"), mar = c(mgp[2] + 1, mgp[1] + 1, 1, mgp[1] +
1.25), debug = getOption("oceDebug"), ...)
Arguments
x |
A lobo object, e.g. as read by read.lobo .
|
which |
A vector of numbers or character strings, indicating the
quantities to plot. These are stacked in a single column. The possible
values for which are as follows: 1 or "temperature" for
a time series of temperature; 2 or "salinity" for salinity;
3 or "TS" for a TS diagram (which uses eos="unesco" ),
4 or "u" for a
timeseries of the u component of velocity; 5 or "v" for a
timeseries of the v component of velocity; 6 or "nitrate" for
a timeseries of nitrate concentration; 7 or "fluorescence" for
a timeseries of fluorescence value.
|
adorn |
(Defunct)
An expression or vector of expressions that contain
R code that is to be executed immediately after each panel of the plot.
If the number of expressions matches the number of panels, then the
expressions are used for the corresponding panels; otherwise, the
expression list is extended to match the number of panels (i.e.
to obtain length(which) elements). Note that adorn
is a dangerous argument, because if the expressions contained
therein set up local storage, there is a chance of entirely
disrupting the plotting. For this reason, adorn was
marked as defunct in June 2016, and will be removed entirely
after the July CRAN release. Users with existing code that uses
adorn should simply plot the panels individually, and
use conventional R functions, e.g. lines etc.,
after each panel, to achieve the desired effect. (See
oce-defunct for notes on other deprecated or
defunct oce features.)
|
mgp |
3-element numerical vector to use for par(mgp) , and also
for par(mar) , computed from this. The default is tighter than the R
default, in order to use more space for the data and less for the axes.
|
mar |
value to be used with par("mar") .
|
debug |
an integer specifying whether debugging information is
to be printed during the processing. This is a general parameter that
is used by many oce functions. Generally, setting debug=0
turns off the printing, while higher values suggest that more information
be printed. If one function calls another, it usually reduces the value of
debug first, so that a user can often obtain deeper debugging
by specifying higher debug values.
|
... |
optional arguments passed to plotting functions.
|
Author(s)
Dan Kelley
See Also
Other functions that plot oce
data: plot,adp-method
,
plot,adv-method
,
plot,amsr-method
,
plot,argo-method
,
plot,bremen-method
,
plot,cm-method
,
plot,coastline-method
,
plot,ctd-method
,
plot,gps-method
,
plot,ladp-method
,
plot,lisst-method
,
plot,met-method
,
plot,odf-method
,
plot,rsk-method
,
plot,satellite-method
,
plot,sealevel-method
,
plot,section-method
,
plot,tidem-method
,
plot,topo-method
,
plot,windrose-method
,
plotProfile
, plotScan
,
plotTS
, tidem-class
Other things related to lobo
data: [[,lobo-method
,
[[<-,lobo-method
, as.lobo
,
lobo-class
, lobo
,
subset,lobo-method
,
summary,lobo-method
[Package
oce version 0.9-22
Index]