getASelfing {pedigreeTools} | R Documentation |
Extends the pedigree according to number of selfing cycles and also optionally computes the Additive Relationship Matrix for that pedigree.
getASelfing(ID, Par1, Par2, nCycles, nCyclesDefault, sepChar = "-F", verbose = FALSE, fileNewPed = NULL, computeA = TRUE)
ID |
is a vector of individual IDs |
Par1 |
vector of IDs of one of the parents |
Par2 |
vector of IDs of the other parent |
nCycles |
vector that indicates number of selfing cycles for each individual. |
nCyclesDefault |
default value of nCycles |
sepChar |
sepChar |
verbose |
print progress |
fileNewPed |
Output csv file (comma separated value) with columns 'label', 'sire', 'dam', with the full pull pedigree expanded taking into account the selfing cycles |
computeA |
Indicates if the A matrix is to be computed |
Returns A matrix computed for the extended pedigree if computeA=TRUE