all.internal {phyclust} | R Documentation

## All Internal Functions of phyclust

### Description

See `all.internal.tzeng` for Tzeng's methods (2005).

The following are all internal functions:
`bootstrap.merge.seq`, `bootstrap.star.tree`,
`bootstrap.seq.nucleotide`, `bootstrap.seq.snp`,
`check.EMC`, `check.label`, `convert.QA.to.vect`,
`my.cat`, `my.format`,
`my.print`, `plotfd`,
`plothist.my`, `translate.EMC`,
`translate.ret`, `unstrsplit`.

The following are all S3 methods:
`code2nid.default`, `code2nid.list`,
`nid2code.default`, `nid2code.list`,
`code2snp.default`, `code2snp.list`,
`snp2code.default`, `snp2code.list`,
`sid2snp.default`, `sid2snp.list`,
`snp2sid.default`, `snp2sid.list`,
`nid2aid.default`, `nid2aid.list`,
`nid2cid.default`, `nid2cid.list`,
`cid2aid.default`, `cid2aid.list`,
`aid2acode.default`, `aid2acode.list`,
`acode2aid.default`, `acode2aid.list`.

### Author(s)

Wei-Chen Chen wccsnow@gmail.com

### References

Phylogenetic Clustering Website: https://snoweye.github.io/phyclust/

[Package phyclust version 0.1-25 Index]