em.control {repfdr} | R Documentation |
Input parameters for the EM algorithm.
em.control(pi.initial = NULL, max.iter = 10000, tol = 1e-12, nr.threads = 0, verbose = TRUE)
pi.initial |
Initial guess for the probabilities of the vectors of associations status. If |
max.iter |
Maximum number of EM iterations. |
tol |
Tolerance (in maximum absolute difference between two EM iterations in estimated probabilities) before declaring convergence and stopping. |
nr.threads |
Number of processing threads to use. If zero (the default), will automatically detect the number of compute cores available and spawn one thread per core. |
verbose |
An indicator of whether to report progress (running iteration number) during computation. |
The function is used inside the control
argument in repfdr
and piem
.
A list with the input values.
## Not run: download.file('http://www.math.tau.ac.il/~ruheller/repfdr_RData/binned_zmat.RData', destfile = "binned_zmat.RData") load(file = "binned_zmat.RData") out <- repfdr(pbz,bz,"replication", control = em.control(pi.initial = c(0.48,rep(0.02,26)), verbose = TRUE, nr.threads = 1)) # iterations are printed; run bit slower (1 thread) ## End(Not run)