labkey.experiment.createRun {Rlabkey} | R Documentation |
Create an experiment run object.
labkey.experiment.createRun(config, dataInputs = NULL, dataOutputs = NULL, dataRows = NULL, materialInputs = NULL, materialOutputs = NULL)
config |
a list of base experiment object properties |
dataInputs |
(optional) a list of experiment data objects to be used as data inputs to the run |
dataOutputs |
(optional) a list of experiment data objects to be used as data outputs to the run |
dataRows |
(optional) a data frame containing data rows to be uploaded to the assay backed run |
materialInputs |
(optional) a list of experiment material objects to be used as material inputs to the run |
materialOutputs |
(optional) a list of experiment material objects to be used as material outputs to the run |
Create an experiment run object which can be used in the saveBatch function.
Returns the object representation of the experiment run object.
Karl Lum
labkey.experiment.saveBatch
,
labkey.experiment.createData
,
labkey.experiment.createMaterial
library(Rlabkey) ## create a non-assay backed run with samples as material inputs and outputs m1 <- labkey.experiment.createMaterial( list(name = "87444063.2604.626"), sampleSetName = "Study Specimens") m2 <- labkey.experiment.createMaterial( list(name = "87444063.2604.625"), sampleSetName = "Study Specimens") run <- labkey.experiment.createRun( list(name="new run"), materialInputs = m1, materialOutputs = m2) labkey.experiment.saveBatch(baseUrl="http://labkey/", folderPath="home", protocolName=labkey.experiment.SAMPLE_DERIVATION_PROTOCOL, runList=run)