MVP.Data.impute {rMVP} | R Documentation |
MVP.Data.impute: To impute the missing genotype Author: Haohao Zhang Build date: Sep 12, 2018
MVP.Data.impute(mvp_prefix, out = NULL, method = "Major", ncpus = NULL, verbose = TRUE)
mvp_prefix |
the prefix of mvp file |
out |
the prefix of output file |
method |
'Major', 'Minor', "Middle" |
ncpus |
number of threads for imputing |
verbose |
whether to print the reminder |
NULL Output files: imputed genotype file
mvpPath <- file.path(system.file("extdata", "05_mvp", package = "rMVP"), "mvp") MVP.Data.impute(mvpPath, file.path(tempdir(), "rMVP.test"), ncpus=1)