MVP.Data.Kin {rMVP} | R Documentation |
Kinship
MVP.Data.Kin(fileKin = TRUE, mvp_prefix = "mvp", out = NULL, priority = "speed", sep = "\t", cpus = 1, verbose = TRUE)
fileKin |
Kinship that represents relationship among individuals, n * n matrix, n is sample size |
mvp_prefix |
Prefix for mvp format files |
out |
prefix of output file name |
priority |
"speed" or "memory" |
sep |
seperator for Kinship file. |
cpus |
the number of cpu |
verbose |
whether to print detail. |
Output file: <out>.kin.bin <out>.kin.desc
geno <- file.path(system.file("extdata", "06_mvp-impute", package = "rMVP"), "mvp.imp") MVP.Data.Kin(TRUE, mvp_prefix=geno, out=file.path(tempdir(), "rMVP.test"))