MVP.Data.MVP2Bfile {rMVP} | R Documentation |
MVP.Data.MVP2Bfile: To transform MVP data to binary format Author: Haohao Zhang Build date: Sep 12, 2018
MVP.Data.MVP2Bfile(bigmat, map, pheno = NULL, out = "mvp.plink", verbose = TRUE)
bigmat |
Genotype in bigmatrix format (0,1,2) |
map |
the map file |
pheno |
the phenotype file |
out |
the name of output file |
verbose |
whether to print the reminder |
NULL Output files: .bed, .bim, .fam
bigmat <- as.big.matrix(matrix(1:6, 3, 2)) map <- matrix(c("rs1", "rs2", "rs3", 1, 1, 1, 10, 20, 30), 3, 3) MVP.Data.MVP2Bfile(bigmat, map, out=file.path(tempdir(), "rMVP.test"))